LOC_Os12g42200.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os12g42200.1 Brachypodium distachyon: Bradi4g01540.1
MSU V7 Locus: LOC_Os12g42200 Panicum virgatum:
TC Family: CPA2 Sorghum bicolor: Sb08g021730
Chromosome: Chr12 Zea mays: GRMZM2G047875_P01
5' End: 26179358 Arabidopsis thaliana:
3' End: 26172871 Cucumis sativus: Cucsa.107090.1;Cucsa.107100.1;Cucsa.107110.1;Cucsa.107120.1
Alternative Splice Products: Glycine max:
Putative Function: ATCHX, putative, expressed Medicago truncatula:
RAP2 Locus: Os12g0616500 Mimulus guttatus: mgf003704m;mgf023316m;mgf023565m
RAP3 Locus: Os12g0616500 Populus trichocarpa:
Ricinus communis: 30190.m010768;30190.m011351
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 12 UCD Ds FST: FI853223;ER936224
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm3209_3.1;RdSpm4894C_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B09100;A07129
Postech T-DNA KO Line: 1D-05620;2A-40440