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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os12g03240.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os12g03240 Panicum virgatum:
TC Family: MOP Sorghum bicolor: Sb03g010660
Chromosome: Chr12 Zea mays:
5' End: 1239252 Arabidopsis thaliana:
3' End: 1238813 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: MATE efflux family protein, putative, expressed Medicago truncatula: Medtr7g104120.2
RAP2 Locus: Os11g0129000 Mimulus guttatus:
RAP3 Locus: Populus trichocarpa: POPTR_0013s06550.1
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 2 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 03Z11HX25;03Z11HX25-2;03Z11HX63
RMD T-DNA KO Line: 03Z11HX25;03Z11HX25-2;03Z11HX63
TRIM T-DNA KO Line: M0025655
Postech T-DNA FST: A06543;A30253;A14085;A32935
Postech T-DNA KO Line: 2A-30366;3A-05782;3A-51919;4A-00271