LOC_Os11g05390.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os11g05390.1 Brachypodium distachyon: Bradi4g42530.1
MSU V7 Locus: LOC_Os11g05390 Panicum virgatum:
TC Family: MFS Sorghum bicolor: Sb05g003130
Chromosome: Chr11 Zea mays: GRMZM2G047187_P01;GRMZM2G047187_P02;GRMZM2G047187_P03;GRMZM2G047187_P04;GRMZM2G047187_P05;GRMZM2G047187_P06;GRMZM2G165530_P01;GRMZM2G165530_P02
5' End: 2417533 Arabidopsis thaliana: AT2G16970.1;AT2G16980.1;AT2G16980.2;AT2G16990.1;AT2G16990.2
3' End: 2413596 Cucumis sativus: Cucsa.370340.1;Cucsa.394030.1
Alternative Splice Products: Glycine max: Glyma10g34820.1
Putative Function: transporter, major facilitator family, putative, expressed Medicago truncatula: Medtr1g117250.1;Medtr1g117260.1
RAP2 Locus: Os11g0151500 Mimulus guttatus: mgf002422m
RAP3 Locus: Os11g0151500 Populus trichocarpa: POPTR_0008s02280.1;POPTR_0010s24380.1
Ricinus communis: 29930.m000617;29930.m000618
Vitis vinifera: GSVIVP00001631001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG021972;AB157493;AB157413;AG207442;AG205896;AG023650
EST/cDNA: NIAS Tos17 KO Line: NC0379_0_105_1A;ND1041_0_101_1A;ND8024_0_102_1A;T07857T;T28385T;T28694T
PASA Status: PASA_validated OTL Tos17 FST: ER893802;ER893382
Topology OTL Tos17 KO Line: ADEE11;ADEG11
Transmembrane Domain (TM): 9 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL521655;CL521653;CL521652;ER887154;ER887153;ER887150
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line: AKGG02;AKGH02
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A14112;A13790;A13789;A13788
Postech T-DNA KO Line: 3A-05513;3A-05798