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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os11g04030.1 Brachypodium distachyon: Bradi4g43580.1;Bradi4g43580.2
MSU V7 Locus: LOC_Os11g04030 Panicum virgatum:
TC Family: MFS Sorghum bicolor: Sb08g008410
Chromosome: Chr11 Zea mays: GRMZM2G022375_P02;GRMZM2G022375_P04
5' End: 1631421 Arabidopsis thaliana: AT3G43790.1;AT3G43790.2;AT3G43790.3;AT5G13740.1;AT5G13750.1;AT5G13750.2;AT5G13750.3
3' End: 1626474 Cucumis sativus: Cucsa.076270.1;Cucsa.076270.2;Cucsa.076270.3
Alternative Splice Products: LOC_Os11g04030.3;LOC_Os11g04030.2;LOC_Os11g04030.4 Glycine max: Glyma06g47110.1;Glyma13g25590.1;Glyma13g25600.1;Glyma13g25620.1;Glyma13g25630.1;Glyma15g35440.1
Putative Function: major facilitator superfamily antiporter, putative, expressed Medicago truncatula: Medtr3g102640.1;Medtr8g073830.1
RAP2 Locus: Os11g0135000 Mimulus guttatus: mgf014790m
RAP3 Locus: Os11g0135000 Populus trichocarpa: POPTR_0006s02710.1;POPTR_0008s01110.1;POPTR_0009s02680.1;POPTR_0016s02500.1
Ricinus communis: 29828.m000382
Vitis vinifera: GSVIVP00033966001;GSVIVP00033971001;GSVIVP00033972001;GSVIVP00033975001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB155265;AG213768;AG212205;AG209583;AG207543;AG206826;AG206806;AG025244;AG025233
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: ND6021_0_402_1A;ND6025_0_503_1A;ND8053_0_502_1A;NE7037_0_701_1A;NF7025_0_504_1A;T06032T;T06303T;T10959T;T21311T
PASA Status: PASA_validated OTL Tos17 FST: CU316706;CU326280;CU326081;CU321746;CU317902;CU320626;CU320505;CU320223;CU319886
Topology OTL Tos17 KO Line: AMJA04;APBD06;APXA09;APXE09;AQHB01;AQVE07;AQWE08;AQZD05;ARUG05
Transmembrane Domain (TM): 12 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11AF19;05Z11HE95
RMD T-DNA KO Line: 05Z11AF19;05Z11HE95
TRIM T-DNA KO Line: M0054600
Postech T-DNA FST:
Postech T-DNA KO Line: