LOC_Os10g39440.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os10g39440.1 Brachypodium distachyon: Bradi3g32210.1;Bradi3g32210.2
MSU V7 Locus: LOC_Os10g39440 Panicum virgatum:
TC Family: MFS Sorghum bicolor: Sb01g030430
Chromosome: Chr10 Zea mays: GRMZM2G083173_P01;GRMZM2G083173_P02
5' End: 21052794 Arabidopsis thaliana: AT4G35300.1;AT4G35300.2;AT4G35300.3
3' End: 21048271 Cucumis sativus: Cucsa.119930.1;Cucsa.119930.2
Alternative Splice Products: LOC_Os10g39440.2 Glycine max: Glyma02g48150.1;Glyma06g00220.1;Glyma13g05980.1
Putative Function: transporter family protein, putative, expressed Medicago truncatula: Medtr3g164110.1
RAP2 Locus: Os10g0539900 Mimulus guttatus: mgf007724m;mgf022496m
RAP3 Locus: Os10g0539900 Populus trichocarpa: POPTR_0004s21690.1;POPTR_0009s16960.1
Ricinus communis: 30100.m000786;30170.m013715
Vitis vinifera: GSVIVP00002919001;GSVIVP00019321001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER887985;ER887199;ER890844
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line: AKPD11;AKPE02
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B12029;A30710;A09185;D10544
Postech T-DNA KO Line: 2B-30174;3A-01324;3A-52352;3D-01515