LOC_Os10g28240.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os10g28240.1 Brachypodium distachyon: Bradi3g26890.1
MSU V7 Locus: LOC_Os10g28240 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor: Sb01g021870
Chromosome: Chr10 Zea mays: GRMZM2G144420_P01
5' End: 14685370 Arabidopsis thaliana: AT3G22910.1;AT3G63380.1
3' End: 14681994 Cucumis sativus: Cucsa.133330.1;Cucsa.263400.1
Alternative Splice Products: Glycine max: Glyma03g31420.1;Glyma08g04980.1;Glyma19g05140.1;Glyma19g34250.1
Putative Function: calcium-transporting ATPase, plasma membrane-type, putative, expressed Medicago truncatula:
RAP2 Locus: Os10g0418100 Mimulus guttatus: mgf019248m
RAP3 Locus: Os10g0418100 Populus trichocarpa: POPTR_0002s04840.1;POPTR_0005s05420.1;POPTR_0005s23710.1;POPTR_0008s15890.1;POPTR_0010s09130.1;POPTR_0013s03760.1
Ricinus communis: 29844.m003207;29844.m003208;29883.m001964;30128.m008598;30128.m008624
Vitis vinifera: GSVIVP00020071001;GSVIVP00020073001;GSVIVP00020075001;GSVIVP00020076001;GSVIVP00020078001;GSVIVP00020080001;GSVIVP00020088001;GSVIVP00020090001;GSVIVP00020092001;GSVIVP00027789001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 8 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: