LOC_Os09g38130.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g38130.1 Brachypodium distachyon: Bradi4g37450.1;Bradi4g37450.2
MSU V7 Locus: LOC_Os09g38130 Panicum virgatum:
TC Family: AEC Sorghum bicolor: Sb01g048490
Chromosome: Chr9 Zea mays: GRMZM2G072632_P01
5' End: 21968222 Arabidopsis thaliana: AT2G17500.1;AT2G17500.2;AT2G17500.3;AT2G17500.4;AT5G65980.1
3' End: 21963498 Cucumis sativus: Cucsa.323200.1;Cucsa.323220.1;Cucsa.323230.1
Alternative Splice Products: LOC_Os09g38130.2 Glycine max: Glyma01g36190.1;Glyma09g32950.1;Glyma11g09250.1
Putative Function: auxin efflux carrier component, putative, expressed Medicago truncatula: Medtr5g024490.1;Medtr5g024590.1;Medtr5g024600.1
RAP2 Locus: Os09g0554300 Mimulus guttatus: mgf007829m;mgf016073m
RAP3 Locus: Os09g0554300 Populus trichocarpa: POPTR_0005s10230.1;POPTR_0365s00230.1
Ricinus communis: 29830.m001469
Vitis vinifera: GSVIVP00019328001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB157849;AG212060;AG209974;AG021527;AG021025
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: H0642_2_102_1A;NC0118_0_502_1A;NE8545_0_101_1A;NF7801_0_102_1A;T30181T
PASA Status: PASA_validated OTL Tos17 FST: CU315416
Topology OTL Tos17 KO Line: ATAG03
Transmembrane Domain (TM): 8 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A03744;A11528;A34130;A11515;A17169;A11529;A11726;A11527;D03855;D01322
Postech T-DNA KO Line: 1B-23723;2D-01206;2D-20033;3A-03466;3A-03476;3A-03667;3A-08680;4A-01356