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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g29239.1 Brachypodium distachyon: Bradi5g10880.1
MSU V7 Locus: LOC_Os09g29239 Panicum virgatum:
TC Family: DMT Sorghum bicolor: Sb02g027100
Chromosome: Chr9 Zea mays: GRMZM2G009344_P01;GRMZM2G416625_P01
5' End: 17771403 Arabidopsis thaliana: AT1G28220.1;AT1G28230.1;AT2G33750.1;AT2G33750.2
3' End: 17755643 Cucumis sativus:
Alternative Splice Products: LOC_Os09g29239.3;LOC_Os09g29239.2 Glycine max: Glyma02g37370.1;Glyma04g10550.1;Glyma06g10420.1
Putative Function: purine permease, putative, expressed Medicago truncatula: Medtr3g150060.1;Medtr3g150070.1;Medtr5g074240.1
RAP2 Locus: Os09g0467400 Mimulus guttatus: mgf019403m;mgf019951m;mgf020818m;mgf026014m
RAP3 Locus: Os09g0467400 Populus trichocarpa: POPTR_0005s17520.1
Ricinus communis: 28623.m000396;29908.m006107
Vitis vinifera: GSVIVP00015153001;GSVIVP00015154001;GSVIVP00015156001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST: FI131891;DU168404;DU168370
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line: RGT2825_5.1;RdSpm4592_3.1;RdSpm808A_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11AS18;04Z11PF92
RMD T-DNA KO Line: 04Z11AS18;04Z11PF92
TRIM T-DNA FST: EI007465;EI007259;EI008561;CZ555813;CZ554681
TRIM T-DNA KO Line: M0010096;M0024454;M0028995;M0040821;M0054944
Postech T-DNA FST: A23033;C08755
Postech T-DNA KO Line: 1B-21539;3A-13970