LOC_Os09g17840.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g17840.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os09g17840 Panicum virgatum:
TC Family: IISP Sorghum bicolor: Sb04g022600
Chromosome: Chr9 Zea mays:
5' End: 10918170 Arabidopsis thaliana: AT1G29310.1;AT2G34250.1;AT2G34250.2
3' End: 10915827 Cucumis sativus: Cucsa.057740.1;Cucsa.273590.1;Cucsa.336870.1;Cucsa.336870.2
Alternative Splice Products: Glycine max: Glyma06g32680.1;Glyma12g17950.1;Glyma12g35990.1;Glyma13g34370.1
Putative Function: protein transport protein Sec61 subunit alpha, putative, expressed Medicago truncatula: Medtr8g068140.1;Medtr8g068450.1;Medtr8g092670.1
RAP2 Locus: Os09g0347700 Mimulus guttatus: mgf009716m;mgf009867m
RAP3 Locus: Os09g0347700 Populus trichocarpa: POPTR_0011s10920.1
Ricinus communis: 30026.m001474
Vitis vinifera: GSVIVP00005279001;GSVIVP00012226001;GSVIVP00027847001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST: 03Z11IC54-2
RMD T-DNA KO Line: 03Z11IC54-2
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: