LOC_Os09g17830.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g17830.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os09g17830 Panicum virgatum:
TC Family: IISP Sorghum bicolor: Sb04g022600
Chromosome: Chr9 Zea mays:
5' End: 10908526 Arabidopsis thaliana: AT1G29310.1;AT2G34250.1;AT2G34250.2
3' End: 10906212 Cucumis sativus: Cucsa.057740.1;Cucsa.273590.1;Cucsa.336870.1;Cucsa.336870.2
Alternative Splice Products: Glycine max: Glyma06g32680.1;Glyma12g17950.1;Glyma12g35990.1;Glyma13g34370.1
Putative Function: protein transport protein Sec61 subunit alpha, putative, expressed Medicago truncatula: Medtr8g068140.1;Medtr8g068450.1;Medtr8g092670.1
RAP2 Locus: Os09g0347500 Mimulus guttatus: mgf009716m;mgf009867m
RAP3 Locus: Os09g0347500 Populus trichocarpa: POPTR_0011s10920.1
Ricinus communis: 30026.m001474
Vitis vinifera: GSVIVP00005279001;GSVIVP00012226001;GSVIVP00027847001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C05016
Postech T-DNA KO Line: 1B-10307