LOC_Os08g43654.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os08g43654.1 Brachypodium distachyon: Bradi3g42290.1;Bradi3g42290.2
MSU V7 Locus: LOC_Os08g43654 Panicum virgatum:
TC Family: MOP Sorghum bicolor: Sb07g024780;Sb07g024790
Chromosome: Chr8 Zea mays:
5' End: 27598700 Arabidopsis thaliana: AT1G47530.1
3' End: 27592835 Cucumis sativus: Cucsa.286420.1;Cucsa.286420.2;Cucsa.286420.3
Alternative Splice Products: Glycine max:
Putative Function: MATE efflux family protein, putative, expressed Medicago truncatula: Medtr5g034470.1
RAP2 Locus: Os08g0550200 Mimulus guttatus: mgf004138m
RAP3 Locus: Os08g0550200 Populus trichocarpa: POPTR_0019s09190.1
Ricinus communis: 27504.m000640;30170.m013980
Vitis vinifera: GSVIVP00009468001;GSVIVP00009469001;GSVIVP00014697001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 12 UCD Ds FST: EI183514;ED551776;ED551616;DX576297
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGT4436_5.1;RdSpm1493A_3.1;RdSpm1493_3.1;RdSpm2910A_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER892778
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AQDG04
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A03754;D13235;D13234
Postech T-DNA KO Line: 1B-23742;4D-50092