LOC_Os08g43120.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os08g43120.1 Brachypodium distachyon: Bradi3g41990.1
MSU V7 Locus: LOC_Os08g43120 Panicum virgatum:
TC Family: ABC Sorghum bicolor:
Chromosome: Chr8 Zea mays: GRMZM2G477872_P01
5' End: 27277540 Arabidopsis thaliana:
3' End: 27268083 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: Plant PDR ABC transporter associated domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os08g0544400 Mimulus guttatus:
RAP3 Locus: Os08g0543950 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG214795;AG207828
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NE0012_0_402_1A;T16547T
PASA Status: PASA_validated OTL Tos17 FST: CU316756;CU322024;CU314874;CU314639;CU325318;CU313869;CU313674;ER893158
Topology OTL Tos17 KO Line: ADPH09;AGRC06;ALWC03;ARWE12;AUQA04;AUYC03;AWBD02;AWDA11
Transmembrane Domain (TM): 13 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL523191;CL518916;CL518915;CL518426;ER892483
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AEGB08;AFDE06;AMCB07
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B07854;B07853;A34266;A03977;A03976;D10467
Postech T-DNA KO Line: 1B-24629;1D-02252;3D-01409;4A-01463