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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os07g15370.1 Brachypodium distachyon: Bradi1g53160.1
MSU V7 Locus: LOC_Os07g15370 Panicum virgatum:
TC Family: Nramp Sorghum bicolor: Sb02g007870
Chromosome: Chr7 Zea mays: GRMZM2G147560_P01
5' End: 8878905 Arabidopsis thaliana:
3' End: 8871436 Cucumis sativus: Cucsa.060540.1;Cucsa.060540.2
Alternative Splice Products: LOC_Os07g15370.2 Glycine max: Glyma06g12190.1
Putative Function: metal transporter Nramp6, putative, expressed Medicago truncatula: Medtr3g100630.1;Medtr3g100650.1
RAP2 Locus: Os07g0257200 Mimulus guttatus: mgf004439m
RAP3 Locus: Os07g0257200 Populus trichocarpa: POPTR_0002s08090.1;POPTR_0002s08100.1;POPTR_0005s20320.1;POPTR_0005s20350.1
Ricinus communis: 29648.m002003;29648.m002004
Vitis vinifera: GSVIVP00015427001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 12 UCD Ds FST: ET067971
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm3838B_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER888300
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AAYC05
RMD T-DNA FST: 03Z11AZ06;03Z11AZ07;03Z11AZ08;03Z11AZ09;03Z11AZ23-3;03Z11AZ43;04Z11BI59;04Z11BI59-2
RMD T-DNA KO Line: 03Z11AZ06;03Z11AZ07;03Z11AZ08;03Z11AZ09;03Z11AZ23-3;03Z11AZ43;04Z11BI59;04Z11BI59-2
TRIM T-DNA KO Line: M0039225
Postech T-DNA FST: D03660;D01598;D03659;D01774
Postech T-DNA KO Line: 2D-01499;2D-01727;2D-11499