LOC_Os05g51610.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g51610.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os05g51610 Panicum virgatum:
TC Family: CaCA Sorghum bicolor:
Chromosome: Chr5 Zea mays:
5' End: 29593841 Arabidopsis thaliana: AT2G38170.1;AT2G38170.3;AT3G51860.1
3' End: 29588646 Cucumis sativus: Cucsa.067230.1
Alternative Splice Products: Glycine max: Glyma01g30610.1;Glyma03g07910.1;Glyma03g07950.1;Glyma07g18150.1;Glyma18g43000.1
Putative Function: sodium/calcium exchanger protein, putative, expressed Medicago truncatula: Medtr3g025620.1;Medtr3g166520.1
RAP2 Locus: Os05g0594200 Mimulus guttatus: mgf010137m;mgf012325m
RAP3 Locus: Os05g0594200 Populus trichocarpa:
Ricinus communis: 29681.m001341;29701.m000596
Vitis vinifera: GSVIVP00021505001;GSVIVP00024105001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST: ET067612;CZ265733
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RDs319_5.1;RdSpm3887_3.1
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11JR46
RMD T-DNA KO Line: 04Z11JR46
TRIM T-DNA FST: EI009047
TRIM T-DNA KO Line: M0059492
Postech T-DNA FST: B03297;B03296;D11250;D11251
Postech T-DNA KO Line: 1C-05163;3D-02258