LOC_Os05g41580.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g41580.1 Brachypodium distachyon: Bradi2g21180.1
MSU V7 Locus: LOC_Os05g41580 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor: Sb09g024300
Chromosome: Chr5 Zea mays:
5' End: 24354543 Arabidopsis thaliana:
3' End: 24347205 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: calcium-transporting ATPase, plasma membrane-type, putative, expressed Medicago truncatula:
RAP2 Locus: Os05g0495600 Mimulus guttatus: mgf012916m
RAP3 Locus: Os05g0495600 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB156105;AB155908;AB155906;AB155710;AB155253;AG214691;AG211999;AG205580;AG024533;AG022525;AG022472;AG021968
EST/cDNA: EST NIAS Tos17 KO Line: NC0378_0_101_1A;NC2289_0_403_1A;NC2440_0_704_1A;NF6811_0_702_1A;T00035R;T14916T;T16031T;T20011T;T21235T;T21237T;T22304T;T23174T
PASA Status: PASA_validated OTL Tos17 FST: CU322715;CU318847;CU315810;CU326324;CU326106;CU313587
Topology OTL Tos17 KO Line: ALNB04;AQYD11;AREE05;ASTG03;ATRD06;AWCG11
Transmembrane Domain (TM): 10 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: CZ557703
TRIM T-DNA KO Line: M0035775
Postech T-DNA FST: A38091;A26956;A24738;D08684
Postech T-DNA KO Line: 2D-41573;3A-15373;3A-17182;4A-50534