LOC_Os05g40330.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g40330.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os05g40330 Panicum virgatum:
TC Family: AEC Sorghum bicolor:
Chromosome: Chr5 Zea mays:
5' End: 23700670 Arabidopsis thaliana: AT5G01990.1
3' End: 23697738 Cucumis sativus: Cucsa.130810.1;Cucsa.130810.2;Cucsa.130810.3
Alternative Splice Products: Glycine max: Glyma09g40760.1;Glyma18g45050.1
Putative Function: auxin efflux carrier component, putative, expressed Medicago truncatula: Medtr7g080730.1
RAP2 Locus: Os05g0481900 Mimulus guttatus: mgf000158m
RAP3 Locus: Os05g0481900 Populus trichocarpa: POPTR_0006s11290.1;POPTR_0016s14840.1
Ricinus communis: 27955.m000384
Vitis vinifera: GSVIVP00033630001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST: CU316867;CU320244
Topology OTL Tos17 KO Line: AQDA11;AROB02
Transmembrane Domain (TM): 9 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI010091
TRIM T-DNA KO Line: M0065249
Postech T-DNA FST: D06260;D06261;D06277
Postech T-DNA KO Line: 2D-31023;2D-31037