LOC_Os05g34980.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g34980.1 Brachypodium distachyon: Bradi2g24910.1
MSU V7 Locus: LOC_Os05g34980 Panicum virgatum:
TC Family: AAAP Sorghum bicolor: Sb09g020790
Chromosome: Chr5 Zea mays: GRMZM2G164814_P01
5' End: 20781283 Arabidopsis thaliana: AT1G77380.1;AT5G09220.1;AT5G63850.1
3' End: 20779070 Cucumis sativus: Cucsa.125300.1;Cucsa.328190.1
Alternative Splice Products: Glycine max: Glyma04g42520.1;Glyma06g12270.1;Glyma13g10070.1;Glyma14g24370.1
Putative Function: amino acid transporter, putative, expressed Medicago truncatula:
RAP2 Locus: Os05g0424000 Mimulus guttatus: mgf008140m;mgf013582m;mgf013618m
RAP3 Locus: Os05g0424000 Populus trichocarpa: POPTR_0002s07960.1;POPTR_0002s07960.2;POPTR_0002s07970.1;POPTR_0002s08000.1;POPTR_0002s08040.1;POPTR_0005s06990.1;POPTR_0005s06990.2;POPTR_0005s20390.1;POPTR_0005s20400.1;POPTR_0007s04710.1
Ricinus communis: 29648.m001992;29648.m001993
Vitis vinifera: GSVIVP00015436001;GSVIVP00019314001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 9 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL520715;CL520714
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AJGB04
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C09307
Postech T-DNA KO Line: 1E-06117