LOC_Os05g02940.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os05g02940.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os05g02940 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor:
Chromosome: Chr5 Zea mays: GRMZM2G141704_P01
5' End: 1086167 Arabidopsis thaliana:
3' End: 1083905 Cucumis sativus:
Alternative Splice Products: LOC_Os05g02940.2 Glycine max:
Putative Function: calcium-transporting ATPase 2, endoplasmic reticulum-type, putative, expressed Medicago truncatula:
RAP2 Locus: Os05g0120700 Mimulus guttatus:
RAP3 Locus: Os05g0120700 Populus trichocarpa: POPTR_0009s03080.1
Ricinus communis: 30039.m000230
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 4 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL517344;CL517343
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line: ACSH09
RMD T-DNA FST: 04Z11CY58
RMD T-DNA KO Line: 04Z11CY58
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: