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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g56160.2 Brachypodium distachyon:
MSU V7 Locus: LOC_Os04g56160 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor:
Chromosome: Chr4 Zea mays:
5' End: 33464931 Arabidopsis thaliana:
3' End: 33457747 Cucumis sativus:
Alternative Splice Products: LOC_Os04g56160.1;LOC_Os04g56160.3 Glycine max:
Putative Function: plasma membrane ATPase, putative, expressed Medicago truncatula:
RAP2 Locus: Os04g0656100 Mimulus guttatus:
RAP3 Locus: Os04g0656100 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG208105;AG022952;AG022078
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NC0451_0_103_1A;NC2645_0_433_1A;NE1507_0_504_1A
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 5 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER889602;ER887551
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AEBA01;AQMD10
RMD T-DNA FST: 03Z11UD23;03Z11UI46;03Z11UL88-3;03Z11UN52;03Z11UO55-2;04Z11ES52;04Z11GW05;04Z11GW24;04Z11GW68;04Z11IX50
RMD T-DNA KO Line: 03Z11UD23;03Z11UI46;03Z11UL88-3;03Z11UN52;03Z11UO55-2;04Z11ES52;04Z11GW05;04Z11GW24;04Z11GW68;04Z11IX50
TRIM T-DNA FST: EI006854;EI008812
TRIM T-DNA KO Line: M0023120;M0057336
Postech T-DNA FST: C12250;D09572;D06573
Postech T-DNA KO Line: 2C-50175;2D-31273;3D-00587