LOC_Os04g55940.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g55940.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os04g55940 Panicum virgatum:
TC Family: CaCA Sorghum bicolor: Sb06g031080
Chromosome: Chr4 Zea mays: GRMZM2G040017_P01;GRMZM2G040017_P02
5' End: 33319375 Arabidopsis thaliana: AT1G55720.1;AT1G55730.1;AT1G55730.2;AT3G13320.1
3' End: 33314630 Cucumis sativus: Cucsa.120130.1;Cucsa.120130.10;Cucsa.120130.11;Cucsa.120130.12;Cucsa.120130.2;Cucsa.120130.3;Cucsa.120130.4;Cucsa.120130.5;Cucsa.120130.6;Cucsa.120130.7;Cucsa.120130.8;Cucsa.120130.9
Alternative Splice Products: LOC_Os04g55940.2 Glycine max:
Putative Function: sodium/calcium exchanger protein, putative, expressed Medicago truncatula: Medtr3g107060.1
RAP2 Locus: Os04g0653200 Mimulus guttatus: mgf000621m;mgf015261m
RAP3 Locus: Os04g0653200 Populus trichocarpa: POPTR_0001s47380.1;POPTR_0011s16970.1
Ricinus communis: 30005.m001242
Vitis vinifera: GSVIVP00029044001;GSVIVP00033462001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST: CU321882
Topology OTL Tos17 KO Line: ALRC05
Transmembrane Domain (TM): 11 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B02770;A36690;A01575;A15694;A18712
Postech T-DNA KO Line: 1B-01124;1C-03965;3A-07333;3A-10136;4A-03547