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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g51610.3 Brachypodium distachyon: Bradi5g20890.1
MSU V7 Locus: LOC_Os04g51610 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor: Sb06g027770
Chromosome: Chr4 Zea mays: GRMZM2G140328_P01;GRMZM2G140328_P03;GRMZM2G140328_P04;GRMZM2G391042_P01
5' End: 30584308 Arabidopsis thaliana: AT4G29900.1;AT5G57110.1;AT5G57110.2
3' End: 30572095 Cucumis sativus: Cucsa.209370.1;Cucsa.209370.2
Alternative Splice Products: LOC_Os04g51610.1 Glycine max: Glyma08g23760.1;Glyma09g06890.1;Glyma13g00420.1;Glyma15g18180.1;Glyma17g06520.1
Putative Function: calcium-transporting ATPase, plasma membrane-type, putative, expressed Medicago truncatula: Medtr2g043050.1
RAP2 Locus: Os04g0605500 Mimulus guttatus: mgf008985m
RAP3 Locus: Os04g0605500 Populus trichocarpa: POPTR_0006s07240.1;POPTR_0010s25730.1;POPTR_0018s13650.1;POPTR_0018s13650.2
Ricinus communis: 30198.m000878
Vitis vinifera: GSVIVP00025300001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG214117;AG208145;AG205585;AG022482
EST/cDNA: EST NIAS Tos17 KO Line: NC2294_0_404_1A;NE1519_0_401_1A;T04886T;T12681T
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 9 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER892984
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line: AFCG08
RMD T-DNA FST: 04Z11AE79;05Z11GR38
RMD T-DNA KO Line: 04Z11AE79;05Z11GR38
TRIM T-DNA KO Line: M0064012
Postech T-DNA FST: A22949;D09521;D03951
Postech T-DNA KO Line: 2D-20144;3A-13908;3D-00536