LOC_Os04g49570.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g49570.1 Brachypodium distachyon: Bradi5g19560.1
MSU V7 Locus: LOC_Os04g49570 Panicum virgatum:
TC Family: GIC Sorghum bicolor:
Chromosome: Chr4 Zea mays: GRMZM2G066489_P03
5' End: 29570115 Arabidopsis thaliana: AT1G42540.1
3' End: 29565558 Cucumis sativus: Cucsa.044290.1;Cucsa.272280.1
Alternative Splice Products: LOC_Os04g49570.2 Glycine max: Glyma04g01760.1;Glyma06g01860.1;Glyma09g32980.1
Putative Function: glutamate receptor, putative, expressed Medicago truncatula: Medtr3g160070.1
RAP2 Locus: Os04g0585200 Mimulus guttatus: mgf006652m;mgf025778m
RAP3 Locus: Os04g0585200 Populus trichocarpa: POPTR_0002s00870.1;POPTR_0005s10570.1;POPTR_0005s27520.1;POPTR_0005s27520.2;POPTR_0005s27520.3;POPTR_0009s16950.1
Ricinus communis:
Vitis vinifera: GSVIVP00019331001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG211173;AG208216;AG024618;AG022148;AG022046;AG021264
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NC0010_0_433_1A;NC0436_0_703_1A;NC0484_0_701_1A;NE1538_0_505_1A;NF3722_0_101_1A;T00495T
PASA Status: PASA_validated OTL Tos17 FST: CU319746;CU319180;CU313994
Topology OTL Tos17 KO Line: AQPB10;ATLE03;AVXB04
Transmembrane Domain (TM): 3 UCD Ds FST: ET025792
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line: RGT6171_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11DE91;05Z11DG17;05Z11DK77
RMD T-DNA KO Line: 05Z11DE91;05Z11DG17;05Z11DK77
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A06928;A10778;A27536;C07777
Postech T-DNA KO Line: 1B-18504;2A-40227;3A-02782;3A-17696