LOC_Os04g47590.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g47590.1 Brachypodium distachyon: Bradi5g18410.1
MSU V7 Locus: LOC_Os04g47590 Panicum virgatum:
TC Family: RND Sorghum bicolor: Sb06g025390
Chromosome: Chr4 Zea mays:
5' End: 28240823 Arabidopsis thaliana: AT1G42470.1;AT4G38350.1
3' End: 28224498 Cucumis sativus: Cucsa.272140.1
Alternative Splice Products: Glycine max: Glyma02g48070.1;Glyma06g02020.1
Putative Function: niemann-Pick C1 protein precursor, putative, expressed Medicago truncatula: Medtr5g106700.1
RAP2 Locus: Os04g0563801 Mimulus guttatus: mgf003199m
RAP3 Locus: Os04g0563801 Populus trichocarpa: POPTR_0002s01050.1;POPTR_0002s01050.2;POPTR_0002s01050.3;POPTR_0005s27320.1;POPTR_0005s27320.2;POPTR_0005s27320.3;POPTR_0005s27320.4;POPTR_0005s27320.5;POPTR_0009s16840.1
Ricinus communis: 30170.m014367
Vitis vinifera: GSVIVP00002883001;GSVIVP00036266001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG207618;AG024387;AG023230
EST/cDNA: EST NIAS Tos17 KO Line: NC2795_0_104_1A;ND4047_0_402_1A;ND9028_0_401_1A
PASA Status: PASA_validated OTL Tos17 FST: CU318503
Topology OTL Tos17 KO Line: AUEA05
Transmembrane Domain (TM): 13 UCD Ds FST: CZ167790
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line: RDs1120_5.1
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11EX29
RMD T-DNA KO Line: 05Z11EX29
TRIM T-DNA FST: CZ555318
TRIM T-DNA KO Line: M0027177
Postech T-DNA FST: B11867;B07443;A22851;A29484;A22852;D01812;D01813
Postech T-DNA KO Line: 1C-16212;2B-30053;2D-01761;3A-13828;3A-51208