LOC_Os04g46940.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g46940.1 Brachypodium distachyon: Bradi5g17990.1
MSU V7 Locus: LOC_Os04g46940 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor: Sb06g024900;Sb06g024910
Chromosome: Chr4 Zea mays: GRMZM2G143512_P01;GRMZM2G144083_P01
5' End: 27835535 Arabidopsis thaliana:
3' End: 27829775 Cucumis sativus: Cucsa.303040.1;Cucsa.334660.1
Alternative Splice Products: Glycine max: Glyma01g42790.1;Glyma01g42800.1;Glyma08g01680.1;Glyma19g32190.1
Putative Function: copper-transporting ATPase 3, putative, expressed Medicago truncatula: Medtr6g086750.1;Medtr8g096490.1;Medtr8g096490.2;Medtr8g096560.1
RAP2 Locus: Os04g0556000 Mimulus guttatus: mgf005457m
RAP3 Locus: Os04g0556000 Populus trichocarpa: POPTR_0001s09210.1;POPTR_0003s12570.1;POPTR_0003s12580.1;POPTR_0003s12580.2
Ricinus communis: 30190.m011197
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB156289;AG214751;AG212670
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NF8524_0_701_1A;T16475T;T23286T
PASA Status: PASA_validated OTL Tos17 FST: CU322874;CU316193;CU318665;CU315717;CU321625;CU317779;CU314239;CU314098;ER893220
Topology OTL Tos17 KO Line: AESA12;AKZG09;AMJD10;AODH08;AOTE10;ASKE02;ASZD05;AVMG12;AVOD06
Transmembrane Domain (TM): 6 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A13583;A25268
Postech T-DNA KO Line: 3A-05341;3A-15787