LOC_Os04g39489.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g39489.1 Brachypodium distachyon: Bradi5g13050.1
MSU V7 Locus: LOC_Os04g39489 Panicum virgatum:
TC Family: AAAP Sorghum bicolor: Sb06g019660
Chromosome: Chr4 Zea mays: GRMZM2G173597_P02
5' End: 23523092 Arabidopsis thaliana: AT5G23810.1;AT5G23810.2
3' End: 23512378 Cucumis sativus:
Alternative Splice Products: LOC_Os04g39489.2 Glycine max: Glyma02g47350.1;Glyma14g01410.1
Putative Function: amino acid transporter, putative, expressed Medicago truncatula: CU013523_1.1;Medtr3g080570.1
RAP2 Locus: Os04g0470700 Mimulus guttatus: mgf001355m
RAP3 Locus: Os04g0470700 Populus trichocarpa: POPTR_0001s47390.1;POPTR_0011s16990.1
Ricinus communis: 29278.m000137;29278.m000138
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 9 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI008440;EI010682
TRIM T-DNA KO Line: M0014206;M0053410
Postech T-DNA FST: B06905;A10433;A25554;A12618;C05133;D04698
Postech T-DNA KO Line: 1B-10629;1C-14117;2D-21158;3A-02461;3A-04515;3A-16006