LOC_Os04g11820.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os04g11820.1 Brachypodium distachyon: Bradi5g02870.1
MSU V7 Locus: LOC_Os04g11820 Panicum virgatum:
TC Family: ABC Sorghum bicolor: Sb06g002300
Chromosome: Chr4 Zea mays: GRMZM2G408110_P01
5' End: 6481870 Arabidopsis thaliana:
3' End: 6475332 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: white-brown complex homolog protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os04g0194500 Mimulus guttatus:
RAP3 Locus: Os04g0194500 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG214368;AG213919;AG213282;AG213240;AG212527;AG211050;AG210565;AG208862;AG021429;AG025494;AG024622
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NE4049_0_703_1A;NF1036_0_405_1A;NF3019_0_702_1A;NF8019_0_405_1A;T04505T;T04776T;T05503T;T06631T;T07599T;T11861T;T14155T
PASA Status: PASA_validated OTL Tos17 FST: CU326292;CU326162;CU325688;CU323967
Topology OTL Tos17 KO Line: AGEF05;AJNC02;ARAB01;ARAB07
Transmembrane Domain (TM): 5 UCD Ds FST: FI852900
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line: RGT6456A_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST: 03Z11UX85;04Z11EC52
RMD T-DNA KO Line: 03Z11UX85;04Z11EC52
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B07548;A21472;A21473
Postech T-DNA KO Line: 1D-01448;3A-12549