LOC_Os03g55100.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g55100.1 Brachypodium distachyon: Bradi1g08060.1
MSU V7 Locus: LOC_Os03g55100 Panicum virgatum:
TC Family: VIC Sorghum bicolor: Sb01g007550
Chromosome: Chr3 Zea mays: GRMZM2G074317_P01;GRMZM2G074317_P02
5' End: 31350836 Arabidopsis thaliana: AT5G15410.1;AT5G15410.2
3' End: 31344934 Cucumis sativus: Cucsa.157990.1;Cucsa.157990.2
Alternative Splice Products: Glycine max: Glyma08g26340.1;Glyma18g49890.1
Putative Function: cyclic nucleotide-gated ion channel 2, putative, expressed Medicago truncatula: Medtr7g011470.1;Medtr7g011720.1
RAP2 Locus: Os03g0758300 Mimulus guttatus: mgf003584m;mgf007947m
RAP3 Locus: Os03g0758300 Populus trichocarpa: POPTR_0017s12550.1;POPTR_0017s12570.1
Ricinus communis: 28124.m000232
Vitis vinifera: GSVIVP00021034001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG024652
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: T00990T
PASA Status: PASA_validated OTL Tos17 FST: CU315439;CU317604;CU317603;CU314493;CU314195;CU320144;ER893366;ER893361;ER893238
Topology OTL Tos17 KO Line: ADBC06;ADBF05;AETG02;APBE10;APBF10;AQJC10;ATCF12;AUZG08;AVLD10
Transmembrane Domain (TM): 5 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL523787
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AMRH06
RMD T-DNA FST: 05Z11AW09;05Z11AW73
RMD T-DNA KO Line: 05Z11AW09;05Z11AW73
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: