LOC_Os03g48310.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g48310.1 Brachypodium distachyon: Bradi4g00520.1
MSU V7 Locus: LOC_Os03g48310 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor:
Chromosome: Chr3 Zea mays:
5' End: 27517321 Arabidopsis thaliana: AT3G47950.1;AT5G62670.1
3' End: 27510164 Cucumis sativus: Cucsa.097990.1;Cucsa.097990.2;Cucsa.097990.4;Cucsa.197480.1;Cucsa.197480.2;Cucsa.197480.3;Cucsa.197480.4
Alternative Splice Products: Glycine max: Glyma04g34370.1;Glyma05g01460.1;Glyma06g20200.1;Glyma17g10420.1
Putative Function: plasma membrane ATPase, putative, expressed Medicago truncatula: Medtr8g129390.1;Medtr8g129390.2
RAP2 Locus: Os03g0689300 Mimulus guttatus: mgf001100m
RAP3 Locus: Os03g0689300 Populus trichocarpa: POPTR_0012s07350.1;POPTR_0015s07710.1;POPTR_0015s07710.2;POPTR_0015s07710.3
Ricinus communis:
Vitis vinifera: GSVIVP00020872001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG214257;AB157680;AB157577;AB157570;AB157510;AB155720;AB155149;AG215036;AG214134;AG214062;AG213399;AG212973;AG211076;AG209857;AG209699;AG207836;AG206013;AG025369;AG025092;AG024800;AG024070;AG023967;AG021445
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NC0069_0_703_1A;ND2067_0_105_1A;ND3025_0_501_1A;ND3025_0_505_1A;NE0014_0_504_1A;NE8010_0_701_1A;NE8502_0_405_1A;NF3033_0_501_1A;NF9832_0_701_1A;T02539T;T05070T;T07115T;T08647T;T12353T;T12742T;T13461T;T17883T;T20133T;T20764T;T28771T;T29011T;T29031T;T29339T
PASA Status: PASA_validated OTL Tos17 FST: CU319747;CU319586;CU323154;CU323050;CU323027;CU323010;CU322701;CU322381;CU322286;CU318555;CU318510;CU326077;CU315044;CU314953;CU325544;CU325519;CU325380;CU321460;CU317611;CU321132;CU321065;CU314433;CU324850;CU324493;CU324259;CU324150;CU320095;CU323921;ER893849;ER893594
Topology OTL Tos17 KO Line: AEOC04;AESE10;AGIE07;AGLF09;AHPE07;AIEF02;AIYB10;AIYC10;AJSC01;AJVA03;AKMA02;AKMG01;AKQC10;AKQH10;ALDG03;ALLB06;AMDG06;AMTA08;ANLH11;AOWA07;APJF04;AQEC01;AQOA01;AQPA09;ARAH09;AUBB03;AUBE02;AUHA12;AUXG08;AVHC12
Transmembrane Domain (TM): 8 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A24467;A24463
Postech T-DNA KO Line: 3A-15150;3A-15156