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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g37984.4 Brachypodium distachyon: Bradi3g16160.1
MSU V7 Locus: LOC_Os03g37984 Panicum virgatum:
TC Family: APC Sorghum bicolor: Sb07g004285
Chromosome: Chr3 Zea mays: GRMZM2G078292_P01
5' End: 21097009 Arabidopsis thaliana: AT1G31820.1;AT1G31830.1;AT1G31830.2
3' End: 21093446 Cucumis sativus:
Alternative Splice Products: LOC_Os03g37984.3;LOC_Os03g37984.5;LOC_Os03g37984.2;LOC_Os03g37984.1 Glycine max: Glyma01g35320.1;Glyma09g34750.1;Glyma16g17460.1
Putative Function: amino acid permease family protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os03g0576900 Mimulus guttatus: mgf000022m
RAP3 Locus: Os03g0576900 Populus trichocarpa: POPTR_0003s10260.1;POPTR_0004s18450.1;POPTR_0004s18450.2
Ricinus communis: 29827.m002595;30170.m014148
Vitis vinifera: GSVIVP00036168001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 02Z15BP48;02Z15BP48-2
RMD T-DNA KO Line: 02Z15BP48;02Z15BP48-2
TRIM T-DNA FST: EI006513;CZ558340
TRIM T-DNA KO Line: M0020436;M0038724
Postech T-DNA FST: B13314;B13315;B02696
Postech T-DNA KO Line: 1C-03853;2B-60219