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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g10640.1 Brachypodium distachyon: Bradi1g70920.1
MSU V7 Locus: LOC_Os03g10640 Panicum virgatum:
TC Family: P-ATPase Sorghum bicolor: Sb01g043620
Chromosome: Chr3 Zea mays: GRMZM2G006977_P01
5' End: 5440327 Arabidopsis thaliana: AT2G22950.1;AT4G37640.1
3' End: 5433906 Cucumis sativus: Cucsa.103220.1
Alternative Splice Products: Glycine max:
Putative Function: calcium-transporting ATPase, plasma membrane-type, putative, expressed Medicago truncatula: Medtr5g015700.1;Medtr8g101510.1
RAP2 Locus: Os03g0203700 Mimulus guttatus: mgf015921m
RAP3 Locus: Os03g0203700 Populus trichocarpa:
Ricinus communis: 30170.m013745
Vitis vinifera: GSVIVP00019659001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG214541;AG020995
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: T02949T;T15319T
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 6 UCD Ds FST: ET025762
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGT6071B_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 05Z11CK36;04Z11AN23-2
RMD T-DNA KO Line: 05Z11CK36;04Z11AN23-2
TRIM T-DNA KO Line: M0001413
Postech T-DNA FST: B03274;B11591;A18745;A20516;C05192
Postech T-DNA KO Line: 1B-10829;1C-05143;2B-20474;3A-10165;3A-11709