LOC_Os03g08900.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g08900.1 Brachypodium distachyon: Bradi1g72010.1
MSU V7 Locus: LOC_Os03g08900 Panicum virgatum:
TC Family: MOP Sorghum bicolor: Sb01g044660
Chromosome: Chr3 Zea mays: GRMZM2G031177_P01
5' End: 4616239 Arabidopsis thaliana: AT5G10420.1;AT5G44050.1;AT5G65380.1
3' End: 4606945 Cucumis sativus: Cucsa.104130.1;Cucsa.160280.1;Cucsa.397760.1
Alternative Splice Products: Glycine max: Glyma01g03090.1;Glyma04g10590.1
Putative Function: MATE efflux family protein, putative, expressed Medicago truncatula: Medtr3g150100.1;Medtr5g034130.1;Medtr5g034150.1
RAP2 Locus: Os03g0188000 Mimulus guttatus: mgf012917m
RAP3 Locus: Os03g0188100 Populus trichocarpa: POPTR_0002s10250.1;POPTR_0007s14390.1
Ricinus communis: 27717.m000089;27717.m000090;29908.m006103
Vitis vinifera: GSVIVP00011453001;GSVIVP00015162001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 12 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI006971;EI010901;CZ558121;CZ555287;CZ553849;CZ552711;CZ552547
TRIM T-DNA KO Line: M0003568;M0005201;M0015973;M0016002;M0025581;M0027107;M0037618
Postech T-DNA FST: A23946
Postech T-DNA KO Line: 3A-14726