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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os03g02670.3 Brachypodium distachyon:
MSU V7 Locus: LOC_Os03g02670 Panicum virgatum:
TC Family: DMT Sorghum bicolor:
Chromosome: Chr3 Zea mays: GRMZM2G143187_P01
5' End: 994725 Arabidopsis thaliana:
3' End: 991364 Cucumis sativus: Cucsa.302730.2;Cucsa.302730.3
Alternative Splice Products: LOC_Os03g02670.2;LOC_Os03g02670.1 Glycine max:
Putative Function: transporter family protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os03g0118200 Mimulus guttatus:
RAP3 Locus: Os03g0118200 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB155909
EST/cDNA: EST NIAS Tos17 KO Line: T21238T
PASA Status: PASA_validated OTL Tos17 FST: CU325842;CU313917
Topology OTL Tos17 KO Line: AGCC10;AVVB07
Transmembrane Domain (TM): 4 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA KO Line: 04Z11DA92
TRIM T-DNA FST: EI007401;EI006575;EI006565;CZ554705
TRIM T-DNA KO Line: M0020896;M0020964;M0025212;M0038677
Postech T-DNA FST: B05766;B05768;A33276
Postech T-DNA KO Line: 1C-10804;4A-00604