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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os02g11760.1 Brachypodium distachyon: Bradi3g07850.1
MSU V7 Locus: LOC_Os02g11760 Panicum virgatum:
TC Family: ABC Sorghum bicolor: Sb04g007260;Sb04g007270
Chromosome: Chr2 Zea mays: GRMZM2G003411_P01
5' End: 6075807 Arabidopsis thaliana: AT1G15520.1
3' End: 6069031 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma04g07420.1;Glyma06g07540.1;Glyma17g30980.1
Putative Function: pleiotropic drug resistance protein, putative, expressed Medicago truncatula: Medtr2g123510.1;Medtr2g123540.1;Medtr2g123550.1
RAP2 Locus: Os02g0208300 Mimulus guttatus: mgf018585m
RAP3 Locus: Os02g0208300 Populus trichocarpa: POPTR_0003s17730.1;POPTR_0003s17740.1;POPTR_0006s26460.1;POPTR_0018s01240.1
Ricinus communis: 29588.m000882;29588.m000884;29912.m005565;29912.m005566;29912.m005568;29912.m005569;30131.m006867
Vitis vinifera: GSVIVP00032575001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG213353;AG207953
EST/cDNA: EST NIAS Tos17 KO Line: NE1001_0_405_1A;T08417T
PASA Status: PASA_validated OTL Tos17 FST: CU321620;CU314760
Topology OTL Tos17 KO Line: AMQB01;AUYG12
Transmembrane Domain (TM): 13 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER890953
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line: ALQB06
RMD T-DNA FST: 03Z11DB67;03Z11DB67-2
RMD T-DNA KO Line: 03Z11DB67;03Z11DB67-2
TRIM T-DNA KO Line: M0062667
Postech T-DNA FST: B07856;A29586;A16817;D07053
Postech T-DNA KO Line: 1D-02255;2D-40041;3A-08376;3A-51301