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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g68050.2 Brachypodium distachyon:
MSU V7 Locus: LOC_Os01g68050 Panicum virgatum:
TC Family: AAAP Sorghum bicolor:
Chromosome: Chr1 Zea mays:
5' End: 39565691 Arabidopsis thaliana:
3' End: 39562495 Cucumis sativus:
Alternative Splice Products: LOC_Os01g68050.1 Glycine max: Glyma05g02780.1;Glyma05g02790.1;Glyma17g13460.1
Putative Function: transmembrane amino acid transporter protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0908600 Mimulus guttatus:
RAP3 Locus: Os01g0908600 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG021593
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NC0158_0_402_1A
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 7 UCD Ds FST: ED481894;CZ593888;CZ593643
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RDs549_5.2;RGT1123_5.1;RdSpm1468_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line:
RMD T-DNA KO Line: 03Z11BR10
TRIM T-DNA FST: EI008974;EI008501
TRIM T-DNA KO Line: M0054120;M0058765
Postech T-DNA FST: A22366;A29453;C04844;D09140
Postech T-DNA KO Line: 1B-09843;3A-13342;3A-51179;3D-00228