LOC_Os01g56420.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g56420.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os01g56420 Panicum virgatum:
TC Family: Ctr Sorghum bicolor: Sb03g035840
Chromosome: Chr1 Zea mays: GRMZM2G042412_P01
5' End: 32524183 Arabidopsis thaliana: AT2G26975.1;AT3G46900.1;AT5G59030.1
3' End: 32523328 Cucumis sativus: Cucsa.146630.1;Cucsa.146640.1;Cucsa.146640.2
Alternative Splice Products: Glycine max: Glyma11g14290.1
Putative Function: ctr copper transporter family protein, putative, expressed Medicago truncatula: Medtr4g087370.1;Medtr4g087380.1
RAP2 Locus: Os01g0770700 Mimulus guttatus: mgf019519m
RAP3 Locus: Os01g0770700 Populus trichocarpa: POPTR_0001s25290.1;POPTR_0006s09440.1;POPTR_0009s04360.1;POPTR_0009s04370.1
Ricinus communis: 28659.m000077
Vitis vinifera: GSVIVP00024199001;GSVIVP00024200001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 2 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11KU75;04Z11KW20;04Z11KX41;04Z11KX82;04Z11NV58
RMD T-DNA KO Line: 04Z11KU75;04Z11KW20;04Z11KX41;04Z11KX82;04Z11NV58
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: B00468
Postech T-DNA KO Line: 1A-18527