LOC_Os01g48680.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g48680.1 Brachypodium distachyon: Bradi2g46510.1
MSU V7 Locus: LOC_Os01g48680 Panicum virgatum:
TC Family: VIC Sorghum bicolor: Sb03g031110
Chromosome: Chr1 Zea mays: GRMZM2G103208_P01
5' End: 27920980 Arabidopsis thaliana: AT4G03560.1
3' End: 27906608 Cucumis sativus: Cucsa.147640.1;Cucsa.147640.2;Cucsa.147640.3
Alternative Splice Products: LOC_Os01g48680.2 Glycine max: Glyma13g37280.1
Putative Function: two pore calcium channel protein 1, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0678500 Mimulus guttatus: mgf006798m
RAP3 Locus: Os01g0678500 Populus trichocarpa: POPTR_0013s13470.1
Ricinus communis: 29983.m003190
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG208215
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: T13147T
PASA Status: PASA_validated OTL Tos17 FST: CU313896;CU323989;ER893777
Topology OTL Tos17 KO Line: AEPC02;AJQD12;AVVC12
Transmembrane Domain (TM): 11 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI008873
TRIM T-DNA KO Line: M0057703
Postech T-DNA FST: A18644;A18645
Postech T-DNA KO Line: 3A-10091