LOC_Os01g42380.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g42380.1 Brachypodium distachyon: Bradi2g43120.1
MSU V7 Locus: LOC_Os01g42380 Panicum virgatum:
TC Family: ABC Sorghum bicolor: Sb03g027480;Sb03g027490;Sb03g027510
Chromosome: Chr1 Zea mays: GRMZM2G100869_P01;GRMZM2G143153_P01
5' End: 24082181 Arabidopsis thaliana: AT1G15520.1
3' End: 24075065 Cucumis sativus: Cucsa.017550.1
Alternative Splice Products: Glycine max:
Putative Function: pleiotropic drug resistance protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0609300 Mimulus guttatus: mgf005929m;mgf025905m
RAP3 Locus: Os01g0609300 Populus trichocarpa:
Ricinus communis:
Vitis vinifera: GSVIVP00034498001;GSVIVP00034512001;GSVIVP00034515001;GSVIVP00034517001;GSVIVP00034523001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST: CU319189;CU321026
Topology OTL Tos17 KO Line: ANHF10;ATGB12
Transmembrane Domain (TM): 13 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL519428;ER891246
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: ADDF11;AGEG07
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST: EI007837
TRIM T-DNA KO Line: M0046223
Postech T-DNA FST: D06337;D09417
Postech T-DNA KO Line: 2D-31087;3D-00452