LOC_Os01g42350.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g42350.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os01g42350 Panicum virgatum:
TC Family: ABC Sorghum bicolor: Sb03g027430;Sb03g027440;Sb03g027460
Chromosome: Chr1 Zea mays:
5' End: 24055918 Arabidopsis thaliana:
3' End: 24047544 Cucumis sativus: Cucsa.017550.1
Alternative Splice Products: Glycine max:
Putative Function: pleiotropic drug resistance protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0609066 Mimulus guttatus: mgf005929m;mgf025905m
RAP3 Locus: Os01g0609000 Populus trichocarpa:
Ricinus communis:
Vitis vinifera: GSVIVP00034498001;GSVIVP00034512001;GSVIVP00034515001;GSVIVP00034517001;GSVIVP00034523001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB157530;AB157247;AB157174;AB156811;AB156547;AB156317;AB155983;AB155814;AB155597;AG214825;AG214807;AG212214;AG210734;AG209640;AG209338;AG208899;AG208871;AG206250;AG205735;AG024931;AG024519;AG023148;AG022850
EST/cDNA: NIAS Tos17 KO Line: NC2609_0_402_1A;NC2743_0_101_1A;ND4518_0_401_1A;NE4503_0_401_1A;NE4507_0_503_1A;NE6023_0_403_1A;NE7047_0_404_1A;NF2034_0_402_1A;NF7028_0_401_1A;T03958T;T06650T;T07861T;T16610T;T16684T;T19036T;T20728T;T21567T;T23395T;T24618T;T25972T;T28037T;T28813T;T38613T
PASA Status: OTL Tos17 FST: CU316590;CU319064;CU316211;CU322646;CU322500;CU326308;CU325802;CU325774;CU325678;CU321669;CU321610;CU317920;CU317589;CU321125;CU324754;CU324731;CU320542;CU320404;CU313627;CU324107;CU323904;ER893476;ER893291
Topology OTL Tos17 KO Line: AECG03;AFCC08;AGBF11;AGDG09;AGGC07;AIGH09;AIPA06;AJND11;AJOG04;ALDD10;ALMD12;AMUG05;AMUH05;AOUB09;AOUE09;APJD10;APTD03;AQEC06;ARAE03;ARYD07;ASLE04;ATSB04;AVZE03
Transmembrane Domain (TM): 13 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: ER889242
Predicted Subcellular Localization: Chloroplast OTL T-DNA KO Line: APYE05
RMD T-DNA FST: 05Z11BP46
RMD T-DNA KO Line: 05Z11BP46
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A26991;A26992;A09726;A09725;C03679;C03680;C07805
Postech T-DNA KO Line: 1B-07210;1B-18530;3A-01832;3A-17217