LOC_Os01g11414.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g11414.1 Brachypodium distachyon: Bradi2g06830.1
MSU V7 Locus: LOC_Os01g11414 Panicum virgatum:
TC Family: CaCA Sorghum bicolor:
Chromosome: Chr1 Zea mays:
5' End: 6139189 Arabidopsis thaliana: AT1G53210.1
3' End: 6134202 Cucumis sativus: Cucsa.122750.1
Alternative Splice Products: LOC_Os01g11414.2 Glycine max: Glyma13g34720.1
Putative Function: sodium/calcium exchanger protein, putative, expressed Medicago truncatula:
RAP2 Locus: Os01g0212400 Mimulus guttatus: mgf001539m;mgf015532m
RAP3 Locus: Os01g0212400 Populus trichocarpa: POPTR_0001s38450.1
Ricinus communis: 29862.m000338
Vitis vinifera: GSVIVP00027777001;GSVIVP00027780001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AG212598;AG206844
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: ND6031_0_503_1A;NF8046_0_101_1A
PASA Status: PASA_validated OTL Tos17 FST: CU319243;CU322794;CU322784;CU321673;CU325017
Topology OTL Tos17 KO Line: AIRC03;AKSB09;ALAA11;AMTD06;ATJG08
Transmembrane Domain (TM): 11 UCD Ds FST: DX576476
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line: RGT4075_5.1
Chloroplast Transit Peptide (ChloroP): ChloroP OTL T-DNA FST: CL521895;CL521894
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line: AKNG02
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C04956;C04955
Postech T-DNA KO Line: 1B-10117