LOC_Os01g08020.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g08020.1 Brachypodium distachyon: Bradi2g04690.1
MSU V7 Locus: LOC_Os01g08020 Panicum virgatum:
TC Family: AE Sorghum bicolor: Sb03g004180
Chromosome: Chr1 Zea mays: GRMZM2G051753_P01
5' End: 3900085 Arabidopsis thaliana: AT1G15460.1;AT1G74810.1
3' End: 3878069 Cucumis sativus: Cucsa.300580.1
Alternative Splice Products: Glycine max: Glyma13g43950.1;Glyma15g01390.1
Putative Function: boron transporter protein, putative, expressed Medicago truncatula: Medtr2g125630.1;Medtr2g125700.1
RAP2 Locus: Os01g0175600 Mimulus guttatus: mgf003820m;mgf011864m
RAP3 Locus: Os01g0175600 Populus trichocarpa: POPTR_0001s17440.1;POPTR_0003s05840.1;POPTR_0006s15960.1;POPTR_0006s26590.1;POPTR_0018s01350.1
Ricinus communis: 29807.m000500;29841.m002751;29841.m002786;29912.m005584
Vitis vinifera: GSVIVP00016835001;GSVIVP00032596001;GSVIVP00034543001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB157619;AG214797;AG214760;AG209909;AG209617;AG209464;AG208981;AG207169;AG206974;AG206957;AG205794;AG205699;AG023332;AG023291;AG022953;AG022546;AG021046
EST/cDNA: NIAS Tos17 KO Line: H0324_4_304_1A;NC2502_0_702_1A;NC2645_0_531_1A;ND0014_0_101_1A;ND6056_0_102_1A;ND6059_0_104_1A;ND7033_0_501_1A;NE4526_0_702_1A;NE7010_0_502_1A;NE7044_0_105_1A;NE8520_0_701_1A;T06005T;T07248T;T07465T;T16366T;T16552T;T29138T
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 10 UCD Ds FST: ED989639;CZ593609
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RDs242_5.1;RdSpm2054B_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL524580;CL518954;ER891696;ER891695
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: ABPF07;AFEB10
RMD T-DNA FST: 04Z11OF24
RMD T-DNA KO Line: 04Z11OF24
TRIM T-DNA FST: EI008244
TRIM T-DNA KO Line: M0050812
Postech T-DNA FST: B11237;A14969;A24633;A01031
Postech T-DNA KO Line: 1A-19545;2B-20007;3A-06604;3A-15291