LOC_Os01g02870.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os01g02870.1 Brachypodium distachyon: Bradi2g01340.1
MSU V7 Locus: LOC_Os01g02870 Panicum virgatum:
TC Family: DMT Sorghum bicolor: Sb03g008060
Chromosome: Chr1 Zea mays:
5' End: 1012410 Arabidopsis thaliana: AT3G18200.1;AT3G18200.2
3' End: 1010259 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma07g11220.1;Glyma09g31040.1
Putative Function: auxin-induced protein 5NG4, putative, expressed Medicago truncatula: Medtr6g086240.1
RAP2 Locus: Os01g0117900 Mimulus guttatus:
RAP3 Locus: Os01g0117900 Populus trichocarpa: POPTR_0015s04130.1
Ricinus communis:
Vitis vinifera: GSVIVP00017753001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST: AB156454;AB155272;AG212362;AG212291;AG212288;AG207429;AG024853;AG022302
EST/cDNA: fl_cDNA NIAS Tos17 KO Line: NC0565_0_103_1A;ND8021_0_506_1A;NF7043_0_104_1A;NF7043_0_504_1A;NF9876_0_502_1A;T03081T;T24005T;T33171T
PASA Status: PASA_validated OTL Tos17 FST: CU316351;CU318725;CU326075;CU313862
Topology OTL Tos17 KO Line: ARBE02;ARZG06;AUCG12;AWFB07
Transmembrane Domain (TM): 10 UCD Ds FST:
N-terminal Signal Peptide (SignalP): SignalP UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11CR84;04Z11CR96
RMD T-DNA KO Line: 04Z11CR84;04Z11CR96
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A32055
Postech T-DNA KO Line: 3A-60510