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Rice TF Database
   Transcription Factor Families  ABI3VP1  Alfin-like  AP2-EREBP  ARF  ARR-B  BBR/BPC  BES1  bHLH  BSD  bZIP  C2C2-CO-like  C2C2-Dof  C2C2-GATA  C2C2-YABBY  C2H2  C3H  CAMTA  CCAAT  CPP  CSD  DBP  E2F-DP  EIL  FAR1  FHA  G2-like  GeBP  GRAS  GRF  HB  HRT  HSF  LFY  LIM  LOB  MADS  mTERF  MYB  MYB-related  NAC  OFP  Orphans  PBF-2-like  PLATZ  RWP-RK  S1Fa-like  SBP  Sigma70-like  SRS  TAZ  TCP  Tify  Trihelix  TUB  ULT  VOZ  WRKY  zf-HD   
   Other Transcriptional Regulators  ARID  AUX_IAA  Coactivator_p15  DDT  GNAT  HMG  IWS1  Jumonji  LUG  MBF1  MED6  MED7  PHD  Pseudo ARR-B  RB  Rcd1-like  SET  SNF2  SOH1  SWI/SNF-BAF60b  SWI/SNF-SWI3  TRAF   
  Sequence Information  MSU/TIGR V7 Model MSU/TIGR V7 Locus Family Chromosome 5' End 3' End Alternative Splice Products MSU/TIGR V6 Annotation RAP2 Locus RAP3 Locus NCBI Blast Check/Uncheck All
  Sequence Quality   TE-related EST/cDNA PASA Status Check/Uncheck All
  Orthologs in Plants  Brachypodium distachyon Panicum virgatum Sorghum bicolor Zea mays Arabidopsis thaliana Cucumis sativus Glycine max Medicago truncatula Mimulus guttatus Populus trichocarpa Ricinus communis Vitis vinifera Check/Uncheck All
  Topology  Transmembrane Domain (TM) N-terminal Signal Peptide (SignalP) Chloroplast Transit Peptide (ChloroP) Predicted Subcellular Localization Check/Uncheck All
  Mutants  NIAS Tos17 FST NIAS Tos17 KO Line OTL Tos17 FST OTL Tos17 KO Line UCD Ds FST UCD Ds KO Line OTL T-DNA FST OTL T-DNA KO Line RMD T-DNA FST RMD T-DNA KO Line TRIM T-DNA FST TRIM T-DNA KO Line Postech T-DNA FST Postech T-DNA KO Line Check/Uncheck All
  Digital Northern Data   Total ESTs Anther Callus Endosperm Flower Immature seed Leaf Mixed Panicle Phloem Pistil Root Root tip Seed Seedling Sheath Shoot Stem Suspension cells Unknown Whole plant Check/Uncheck All
  MPSS mRNA Data   NYR NRA NRB NGD NST NYL NLA NLB NLC NLD NME NPO NOS NIP NGS NCA NSR NSL NDR NDL NCR NCL XC00 XC06 XC24 XR03 XR06 XR12 XR24 XR48 XS03 XS06 XS12 XS24 XS48 MR03 MR06 MR12 MR24 MR48 MS03 MS06 MS12 MS24 MS48 MS96 MC00 MC24 I9RO I9RR I9LA I9LB I9LC I9LD I9ME FRO FRR FLA FLB FLC FLD FME PSC PSI PSL PSN PSY PLA PLW PLC Check/Uncheck All
  MPSS Small RNA Data   STM SNU FLR SNM ABA UNT Check/Uncheck All
  Microarray Data   Show Average Heatmap
 Select Heatmap Scale Bar for Single Channel Array: 7,13
 Select Heatmap Scale Bar for Two Channel Array: -1,1 -2,2 -3,3
 Affymetrix 
 Agilent 22K 
 BGI/Yale 
 NSF 20K 
 NSF 45K 
   
MSU V7 Model MSU V7 Locus
LOC_Os01g65730.1LOC_Os01g65730
LOC_Os07g28840.1LOC_Os07g28840
LOC_Os08g14660.1LOC_Os08g14660
LOC_Os09g24530.1LOC_Os09g24530
LOC_Os05g50980.1LOC_Os05g50980
LOC_Os12g13460.1LOC_Os12g13460
LOC_Os02g50100.1LOC_Os02g50100
LOC_Os02g49326.1LOC_Os02g49326
LOC_Os08g08210.1LOC_Os08g08210
LOC_Os08g30910.1LOC_Os08g30910
LOC_Os06g03676.1LOC_Os06g03676
LOC_Os09g19830.1LOC_Os09g19830
LOC_Os04g45990.1LOC_Os04g45990
LOC_Os01g70220.1LOC_Os01g70220
LOC_Os08g45130.1LOC_Os08g45130
LOC_Os07g25450.1LOC_Os07g25450
LOC_Os11g38900.1LOC_Os11g38900
LOC_Os12g03460.1LOC_Os12g03460
LOC_Os11g03700.1LOC_Os11g03700
LOC_Os01g59620.1LOC_Os01g59620
LOC_Os05g41172.2LOC_Os05g41172
LOC_Os05g41172.1LOC_Os05g41172
LOC_Os06g16390.1LOC_Os06g16390
LOC_Os03g19480.1LOC_Os03g19480
LOC_Os12g41900.1LOC_Os12g41900
LOC_Os08g34370.1LOC_Os08g34370
LOC_Os02g39800.1LOC_Os02g39800
LOC_Os09g13740.2LOC_Os09g13740
LOC_Os09g13740.1LOC_Os09g13740
LOC_Os01g46700.1LOC_Os01g46700
LOC_Os04g34976.2LOC_Os04g34976
LOC_Os04g34976.1LOC_Os04g34976
LOC_Os02g34850.1LOC_Os02g34850
LOC_Os02g47900.1LOC_Os02g47900
LOC_Os02g40770.2LOC_Os02g40770
LOC_Os02g40770.1LOC_Os02g40770