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Rice TF Database
   Transcription Factor Families  ABI3VP1  Alfin-like  AP2-EREBP  ARF  ARR-B  BBR/BPC  BES1  bHLH  BSD  bZIP  C2C2-CO-like  C2C2-Dof  C2C2-GATA  C2C2-YABBY  C2H2  C3H  CAMTA  CCAAT  CPP  CSD  DBP  E2F-DP  EIL  FAR1  FHA  G2-like  GeBP  GRAS  GRF  HB  HRT  HSF  LFY  LIM  LOB  MADS  mTERF  MYB  MYB-related  NAC  OFP  Orphans  PBF-2-like  PLATZ  RWP-RK  S1Fa-like  SBP  Sigma70-like  SRS  TAZ  TCP  Tify  Trihelix  TUB  ULT  VOZ  WRKY  zf-HD   
   Other Transcriptional Regulators  ARID  AUX_IAA  Coactivator_p15  DDT  GNAT  HMG  IWS1  Jumonji  LUG  MBF1  MED6  MED7  PHD  Pseudo ARR-B  RB  Rcd1-like  SET  SNF2  SOH1  SWI/SNF-BAF60b  SWI/SNF-SWI3  TRAF   
  Sequence Information  MSU/TIGR V7 Model MSU/TIGR V7 Locus Family Chromosome 5' End 3' End Alternative Splice Products MSU/TIGR V6 Annotation RAP2 Locus RAP3 Locus NCBI Blast Check/Uncheck All
  Sequence Quality   TE-related EST/cDNA PASA Status Check/Uncheck All
  Orthologs in Plants  Brachypodium distachyon Panicum virgatum Sorghum bicolor Zea mays Arabidopsis thaliana Cucumis sativus Glycine max Medicago truncatula Mimulus guttatus Populus trichocarpa Ricinus communis Vitis vinifera Check/Uncheck All
  Topology  Transmembrane Domain (TM) N-terminal Signal Peptide (SignalP) Chloroplast Transit Peptide (ChloroP) Predicted Subcellular Localization Check/Uncheck All
  Mutants  NIAS Tos17 FST NIAS Tos17 KO Line OTL Tos17 FST OTL Tos17 KO Line UCD Ds FST UCD Ds KO Line OTL T-DNA FST OTL T-DNA KO Line RMD T-DNA FST RMD T-DNA KO Line TRIM T-DNA FST TRIM T-DNA KO Line Postech T-DNA FST Postech T-DNA KO Line Check/Uncheck All
  Digital Northern Data   Total ESTs Anther Callus Endosperm Flower Immature seed Leaf Mixed Panicle Phloem Pistil Root Root tip Seed Seedling Sheath Shoot Stem Suspension cells Unknown Whole plant Check/Uncheck All
  MPSS mRNA Data   NYR NRA NRB NGD NST NYL NLA NLB NLC NLD NME NPO NOS NIP NGS NCA NSR NSL NDR NDL NCR NCL XC00 XC06 XC24 XR03 XR06 XR12 XR24 XR48 XS03 XS06 XS12 XS24 XS48 MR03 MR06 MR12 MR24 MR48 MS03 MS06 MS12 MS24 MS48 MS96 MC00 MC24 I9RO I9RR I9LA I9LB I9LC I9LD I9ME FRO FRR FLA FLB FLC FLD FME PSC PSI PSL PSN PSY PLA PLW PLC Check/Uncheck All
  MPSS Small RNA Data   STM SNU FLR SNM ABA UNT Check/Uncheck All
  Microarray Data   Show Average Heatmap
 Select Heatmap Scale Bar for Single Channel Array: 7,13
 Select Heatmap Scale Bar for Two Channel Array: -1,1 -2,2 -3,3
 Affymetrix 
 Agilent 22K 
 BGI/Yale 
 NSF 20K 
 NSF 45K 
   
MSU V7 Model MSU V7 Locus
LOC_Os02g22020.1LOC_Os02g22020
LOC_Os12g39640.1LOC_Os12g39640
LOC_Os03g55590.1LOC_Os03g55590
LOC_Os07g02800.3LOC_Os07g02800
LOC_Os07g02800.2LOC_Os07g02800
LOC_Os01g08160.1LOC_Os01g08160
LOC_Os10g32600.1LOC_Os10g32600
LOC_Os03g45194.1LOC_Os03g45194
LOC_Os03g55760.1LOC_Os03g55760
LOC_Os12g01490.1LOC_Os12g01490
LOC_Os11g01480.1LOC_Os11g01480
LOC_Os06g35140.1LOC_Os06g35140
LOC_Os02g14490.1LOC_Os02g14490
LOC_Os10g39550.1LOC_Os10g39550
LOC_Os03g03760.1LOC_Os03g03760
LOC_Os04g47890.1LOC_Os04g47890
LOC_Os02g45080.1LOC_Os02g45080
LOC_Os06g45890.1LOC_Os06g45890
LOC_Os02g07170.1LOC_Os02g07170
LOC_Os04g56990.2LOC_Os04g56990
LOC_Os04g56990.3LOC_Os04g56990
LOC_Os04g56990.1LOC_Os04g56990
LOC_Os03g21240.1LOC_Os03g21240
LOC_Os07g25710.2LOC_Os07g25710
LOC_Os07g25710.3LOC_Os07g25710
LOC_Os07g25710.1LOC_Os07g25710
LOC_Os07g25710.4LOC_Os07g25710
LOC_Os06g49040.1LOC_Os06g49040
LOC_Os02g04640.1LOC_Os02g04640
LOC_Os08g25820.2LOC_Os08g25820
LOC_Os08g25820.1LOC_Os08g25820
LOC_Os09g12770.2LOC_Os09g12770
LOC_Os09g12770.1LOC_Os09g12770
LOC_Os06g40710.1LOC_Os06g40710
LOC_Os05g41240.3LOC_Os05g41240
LOC_Os05g41240.2LOC_Os05g41240
LOC_Os05g41240.1LOC_Os05g41240
LOC_Os08g33750.1LOC_Os08g33750
LOC_Os02g47190.1LOC_Os02g47190
LOC_Os09g12750.1LOC_Os09g12750
LOC_Os08g25799.1LOC_Os08g25799
LOC_Os06g45410.1LOC_Os06g45410
LOC_Os02g07770.1LOC_Os02g07770
LOC_Os05g40960.1LOC_Os05g40960
LOC_Os03g20900.1LOC_Os03g20900
LOC_Os07g48596.1LOC_Os07g48596
LOC_Os09g23200.1LOC_Os09g23200
LOC_Os08g33050.1LOC_Os08g33050
LOC_Os08g06370.1LOC_Os08g06370
LOC_Os02g46940.1LOC_Os02g46940
LOC_Os01g62660.1LOC_Os01g62660
LOC_Os05g34110.1LOC_Os05g34110
LOC_Os01g74020.1LOC_Os01g74020
LOC_Os06g24070.1LOC_Os06g24070
LOC_Os01g13740.2LOC_Os01g13740
LOC_Os01g13740.1LOC_Os01g13740