LOC_Os12g42400.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os12g42400.1 Brachypodium distachyon: Bradi4g01380.1
MSU V7 Locus: LOC_Os12g42400 Panicum virgatum:
Family: CCAAT Sorghum bicolor: Sb08g021910
Chromosome: Chr12 Zea mays:
5' End: 26351286 Arabidopsis thaliana: AT3G05690.1;AT5G06510.1;AT5G06510.2;AT5G06510.3
3' End: 26346863 Cucumis sativus: Cucsa.241980.1
Alternative Splice Products: LOC_Os12g42400.2;LOC_Os12g42400.3;LOC_Os12g42400.4 Glycine max: Glyma02g35190.1;Glyma03g36140.1;Glyma10g10240.1;Glyma19g38800.1
Putative Function: nuclear transcription factor Y subunit, putative, expressed Medicago truncatula: Medtr1g149800.1
RAP2 Locus: Os12g0618600 Mimulus guttatus:
RAP3 Locus: Os12g0618600 Populus trichocarpa: POPTR_0006s21640.1;POPTR_0006s21640.2;POPTR_0006s21640.3;POPTR_0006s21640.4;POPTR_0016s06860.1;POPTR_0016s06860.2;POPTR_0016s06860.3
Ricinus communis: 29333.m001059
Vitis vinifera: GSVIVP00003534001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Secretory pathway OTL T-DNA KO Line:
RMD T-DNA FST: 04Z11AQ26
RMD T-DNA KO Line: 04Z11AQ26
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: D11549
Postech T-DNA KO Line: 3D-02559