LOC_Os12g40890.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os12g40890.1 Brachypodium distachyon: Bradi4g02600.1;Bradi4g02600.2;Bradi4g02600.3;Bradi4g02600.4
MSU V7 Locus: LOC_Os12g40890 Panicum virgatum:
Family: AUX_IAA Sorghum bicolor: Sb08g020580
Chromosome: Chr12 Zea mays: GRMZM2G138268_P01;GRMZM2G138268_P02
5' End: 25316229 Arabidopsis thaliana: AT3G04730.1;AT3G23050.1;AT4G14550.1
3' End: 25310812 Cucumis sativus: Cucsa.254870.1;Cucsa.386640.1
Alternative Splice Products: Glycine max: Glyma02g16080.1;Glyma03g31530.1;Glyma03g40760.1;Glyma10g03720.1;Glyma10g32340.1;Glyma19g34380.1;Glyma20g35270.1;Glyma20g36790.1
Putative Function: OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed Medicago truncatula: Medtr1g117600.1
RAP2 Locus: Os12g0601300 Mimulus guttatus: mgf002264m;mgf004369m;mgf007871m;mgf013963m
RAP3 Locus: Os12g0601300 Populus trichocarpa: POPTR_0002s04580.1;POPTR_0005s05560.1;POPTR_0005s23980.1;POPTR_0005s23980.2;POPTR_0008s16110.1;POPTR_0010s08880.1;POPTR_0013s03870.1
Ricinus communis: 29598.m000460;29883.m001993
Vitis vinifera: GSVIVP00007456001;GSVIVP00020121001;GSVIVP00023841001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: