LOC_Os11g45530.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os11g45530.1 Brachypodium distachyon: Bradi2g36810.1;Bradi3g51320.1
MSU V7 Locus: LOC_Os11g45530 Panicum virgatum:
Family: FAR1 Sorghum bicolor: Sb02g002703
Chromosome: Chr11 Zea mays:
5' End: 27567463 Arabidopsis thaliana: AT1G76320.1;AT1G76320.2;AT2G32250.1;AT2G32250.2;AT2G32250.3;AT2G32250.4;AT3G22170.1;AT3G22170.2;AT4G15090.1
3' End: 27563288 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma08g18380.1
Putative Function: transposon protein, putative, unclassified, expressed Medicago truncatula: Medtr5g094150.1;Medtr6g062340.1;Medtr7g068470.1
RAP2 Locus: Os11g0681400 Mimulus guttatus: mgf008053m;mgf008660m;mgf009829m;mgf014333m
RAP3 Locus: Populus trichocarpa:
Ricinus communis: 29841.m002892
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST: AG023341;AG025411
EST/cDNA: NIAS Tos17 KO Line: T07190T;T07284T
PASA Status: OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: CZ593371;CZ444093
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RDs1947_5.1;RdSpm512_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST:
Postech T-DNA KO Line: