LOC_Os10g42160.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os10g42160.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os10g42160 Panicum virgatum:
Family: FAR1 Sorghum bicolor: Sb06g020630;Sb10g022742;Sb10g027335
Chromosome: Chr10 Zea mays:
5' End: 22679158 Arabidopsis thaliana:
3' End: 22677226 Cucumis sativus:
Alternative Splice Products: Glycine max: Glyma03g22670.1;Glyma04g12260.1;Glyma06g48170.1;Glyma08g45680.1;Glyma11g13610.1;Glyma12g05600.1;Glyma13g41920.1;Glyma15g03440.1;Glyma15g03470.1;Glyma18g24510.1
Putative Function: transposon protein, putative, unclassified, expressed Medicago truncatula:
RAP2 Locus: Mimulus guttatus:
RAP3 Locus: Populus trichocarpa:
Ricinus communis: 29569.m000147;29630.m000789
Vitis vinifera: GSVIVP00009838001;GSVIVP00021862001;GSVIVP00031384001;GSVIVP00034752001
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST:
EST/cDNA: EST NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 1 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: C08120
Postech T-DNA KO Line: 1B-19516