LOC_Os10g41620.1

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Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os10g41620.1 Brachypodium distachyon:
MSU V7 Locus: LOC_Os10g41620 Panicum virgatum:
Family: SNF2 Sorghum bicolor:
Chromosome: Chr10 Zea mays:
5' End: 22414855 Arabidopsis thaliana:
3' End: 22407442 Cucumis sativus:
Alternative Splice Products: Glycine max:
Putative Function: retrotransposon protein, putative, unclassified, expressed Medicago truncatula:
RAP2 Locus: Os10g0565700 Mimulus guttatus:
RAP3 Locus: Os10g0565700 Populus trichocarpa:
Ricinus communis:
Vitis vinifera:
Sequence Quality Mutant Information
TE-related: TE_related NIAS Tos17 FST: AG023568;AB157911;AB157222;AG212351;AG206911;AG205870;AG023729;AG021171
EST/cDNA: NIAS Tos17 KO Line: H0724_2_102_1A;ND1019_0_401_1A;ND1019_0_701_1A;ND2002_0_401_1A;ND6047_0_702_1A;NF9862_0_406_1A;T27825T;T30703T
PASA Status: OTL Tos17 FST: CU317833
Topology OTL Tos17 KO Line: AOSE11
Transmembrane Domain (TM): 0 UCD Ds FST: EI184355
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RGT5151_5.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Mitochondrion OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A05727
Postech T-DNA KO Line: 2A-20216