LOC_Os10g39190.1

This page can work properly on Mozilla Firefox and Opera, but for Windows Internet Explorer and Macintosh Safari, the Adobe SVG viewer plug-in is required for viewing the histogram representation of expression patterns from Digital Northern and MPSS data and can be freely downloaded.

Digital Northern Data
MPSS mRNA Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os10g39190.1 Brachypodium distachyon: Bradi3g32140.1
MSU V7 Locus: LOC_Os10g39190 Panicum virgatum:
Family: ABI3VP1 Sorghum bicolor: Sb01g030520
Chromosome: Chr10 Zea mays: GRMZM2G125095_P01;GRMZM2G142999_P01
5' End: 20917099 Arabidopsis thaliana: AT1G01030.1;AT2G46870.1;AT3G61970.1
3' End: 20916161 Cucumis sativus: Cucsa.193290.1
Alternative Splice Products: Glycine max: Glyma03g42300.1;Glyma07g05380.1;Glyma16g01950.1;Glyma19g45090.1
Putative Function: B3 DNA binding domain containing protein, expressed Medicago truncatula:
RAP2 Locus: Os10g0537100 Mimulus guttatus: mgf023769m
RAP3 Locus: Os10g0537100 Populus trichocarpa: POPTR_0001s45650.1;POPTR_0002s18260.1;POPTR_0011s15270.1;POPTR_0014s10290.1;POPTR_0014s10290.2;POPTR_0014s10290.3
Ricinus communis: 30068.m002615
Vitis vinifera: GSVIVP00000473001;GSVIVP00026190001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: NIAS Tos17 KO Line:
PASA Status: OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST: ET189806
N-terminal Signal Peptide (SignalP): UCD Ds KO Line: RdSpm4139B_3.1
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST:
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line:
RMD T-DNA FST:
RMD T-DNA KO Line:
TRIM T-DNA FST:
TRIM T-DNA KO Line:
Postech T-DNA FST: A02471;A28025;A02506
Postech T-DNA KO Line: 1B-03922;1B-04026;3A-18233