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Digital Northern Data
MPSS smallRNA Data
Sequence Information Orthologs in Plants
MSU V7 Model: LOC_Os09g38790.1 Brachypodium distachyon: Bradi4g38000.1;Bradi4g38000.2;Bradi4g38000.3
MSU V7 Locus: LOC_Os09g38790 Panicum virgatum:
Family: C2H2 Sorghum bicolor: Sb02g032810
Chromosome: Chr9 Zea mays: GRMZM2G081812_P01;GRMZM2G081812_P02;GRMZM2G081812_P05
5' End: 22291746 Arabidopsis thaliana: AT1G30970.1;AT1G30970.2
3' End: 22287174 Cucumis sativus: Cucsa.048660.1;Cucsa.048660.2;Cucsa.048660.3;Cucsa.048660.4;Cucsa.048660.5
Alternative Splice Products: LOC_Os09g38790.2;LOC_Os09g38790.3 Glycine max: Glyma05g34280.1;Glyma08g05390.1
Putative Function: ZOS9-19 - C2H2 zinc finger protein, expressed Medicago truncatula: Medtr4g156140.1
RAP2 Locus: Os09g0560900 Mimulus guttatus: mgf011479m;mgf015174m;mgf015709m
RAP3 Locus: Os09g0560900 Populus trichocarpa: POPTR_0001s16080.1;POPTR_0001s16080.2;POPTR_0003s07180.1;POPTR_0003s07180.2
Ricinus communis: 29994.m000464
Vitis vinifera: GSVIVP00030113001;GSVIVP00037541001
Sequence Quality Mutant Information
TE-related: NIAS Tos17 FST:
EST/cDNA: fl_cDNA NIAS Tos17 KO Line:
PASA Status: PASA_validated OTL Tos17 FST:
Topology OTL Tos17 KO Line:
Transmembrane Domain (TM): 0 UCD Ds FST:
N-terminal Signal Peptide (SignalP): UCD Ds KO Line:
Chloroplast Transit Peptide (ChloroP): OTL T-DNA FST: CL520773;CL520772
Predicted Subcellular Localization: Any other location OTL T-DNA KO Line: AJJE04
RMD T-DNA KO Line: 04Z11JB42
TRIM T-DNA FST: EI008333;CZ558920
TRIM T-DNA KO Line: M0051932;M0051940
Postech T-DNA FST: B05253;B05252;C12351;D04381;D04544;D04384;D04380
Postech T-DNA KO Line: 1C-09549;2C-50309;2D-20890;2D-20891;2D-21027